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COVID-19 experience

2 minute read

Published: June 05, 2022

This is a diary for my COVID symptoms from May 16th-May 24th 2022. Translated from my original Chinese diary.

This Website

less than 1 minute read

Published: June 24, 2020

Just refurnished this new website. It was powered by Jekyll & AcademicPages. The domain yunyishen.ml was registered from dot.tk for free (as long as you renew every year).

gallery

preprints

Bayesian chain graph LASSO Models to Learn Sparse Networks with Predictors

Published: December 20, 2020

Conditional Auto-Regressive LASSO

Recommended citation: Shen, Yunyi, and Solis-Lemus, Claudia*. "Bayesian chain graph LASSO Models to Learn Sparse Networks with Predictors." arXiv (2020). https://arxiv.org/abs/2012.08397

The Effect of the Prior and the Experimental Design on the Inference of the Precision Matrix in Gaussian Chain Graph Models

Published: June 30, 2021

Conditional Auto-Regression experimental design

Recommended citation: Shen, Yunyi, and Solis-Lemus, Claudia*. "The Effect of the Prior and the Experimental Design on the Inference of the Precision Matrix in Gaussian Chain Graph Models." arXiv (2021). https://arxiv.org/abs/2107.01306

CARlasso: An R package for the estimation of sparse microbial networks with predictors

Published: August 10, 2021

Conditional Auto-Regressive LASSO

Recommended citation: Shen, Yunyi, and Solis-Lemus, Claudia*. "CARlasso: An R package for the estimation of sparse microbial networks with predictors." arXiv (2020). https://arxiv.org/abs/2107.13763

Sparse Gaussian chain graphs with the spike-and-slab LASSO: Algorithms and asymptotics

Published: July 14, 2022

Chain graph with spike-and-slab LASSO

Recommended citation: Shen, Yunyi, Solis-Lemus, Claudia* and Deshpande, Sameer K*. "Sparse Gaussian chain graphs with the spike-and-slab LASSO: Algorithms and asymptoticss." arXiv (2022). https://arxiv.org/abs/2207.07020

On the posterior contraction of the multivariate spike-and-slab LASSO

Published: July 14, 2022

Chain graph with spike-and-slab LASSO

Recommended citation: Shen, Yunyi, and Deshpande, Sameer K. "On the posterior contraction of the multivariate spike-and-slab LASSO." arXiv (2022). https://arxiv.org/abs/2209.04389

Identify local limiting factors of species distribution using min-linear logistic regression

Published: February 18, 2023

Chain graph with spike-and-slab LASSO

Recommended citation: Hongliang Bu and Shen, Yunyi* "Identify local limiting factors of species distribution using min-linear logistic regression." arXiv (2023). https://arxiv.org/abs/2302.09217

publications

Evaluating the effectiveness of functional zones for black muntjac (Muntiacus crinifrons) protection in qianjiangyuan national park pilot site

Published in Biodiversity Science, 27(1)., 2019

Black Muntjc distribution in QJY nation park

Recommended citation: Yu, J., Shen, Y., Song, X., Chen, X., Li, S.*, & Shen, X*. (2019). Evaluating the effectiveness of functional zones for black muntjac (Muntiacus crinifrons) protection in qianjiangyuan national park pilot site. Biodiversity Science, 27(1). https://doi.org/10.17520/biods.2018246

Using an integrative mapping approach to identify the distribution range and conservation needs of a large threatened mammal, the Asiatic black bear, in China

Published in accepted Global Ecology and Conservation, 2021

Asiatic Black Bear

Recommended citation: Shen, Yunyi, Liu, Mingzhang, Shen, Xiaoli* and Li, Sheng*. "Using an integrative mapping approach to identify the distribution range and conservation needs of a large threatened mammal, the Asiatic black bear, in China." Global Ecology and Conservation 2021. https://www.sciencedirect.com/science/article/pii/S2351989421003814?via%3Dihub

Spatially Explicit Modeling of Community Occupancy using Markov Random Field Models with Imperfect Observation: Mesocarnivores in Apostle Islands National Lakeshore.

Published in Ecological Modelling, 2021

Markov Random Field based occupancy model

Recommended citation: Shen, Yunyi*, Olson, Erik, and Van Deelen, Timothy. R. (2021). Spatially Explicit Modeling of Community Occupancy using Markov Random Field Models with Imperfect Observation: Mesocarnivores in Apostle Islands National Lakeshore. Ecological Modelling 459C (2021) 109712. https://www.sciencedirect.com/science/article/pii/S0304380021002660?via%3Dihub

Species-specific responses to white-nose syndrome in the Great Lakes region. Ecology and Evolution

Published in Ecology and Evolution, 13:e10267., 2023

Bats

Recommended citation: Mallinger, J., Goodwin, K., Kirschbaum, A., Shen, Y., Gillam, E., Olson E.*. (2023). Species-specific responses to white-nose syndrome in the Great Lakes region. Ecology and Evolution, 13:e10267 http://dx.doi.org/10.1002/ece3.10267